Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZPR_2629Flavoprotein NADH-dependent oxidoreductase. (366 aa)    
Predicted Functional Partners:
ZPR_3659
Electron transfer flavoprotein subunit beta.
  
 
 0.736
ZPR_3660
Electron transfer flavoprotein subunit alpha.
   
 
 0.666
ZPR_3298
NADPH:quinone reductase.
 
  
 0.576
ZPR_2628
Cyclic nucleotide-binding domain-containing protein.
 
    0.569
ZPR_1756
Zinc-type alcohol dehydrogenase.
 
  
 0.560
ZPR_1889
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
  
 0.533
ZPR_0582
Putative molybdopterin oxidoreductase.
   
  
 0.497
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.497
ZPR_2469
3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.496
ZPR_2620
Zinc-type alcohol dehydrogenase.
 
  
 0.442
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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