Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2890Conserved hypothetical protein. (150 aa)    
Predicted Functional Partners:
ZPR_4470
4-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
 
 0.745
ZPR_1714
Isochorismate synthase.
  
  
 0.686
ZPR_0586
Cytochrome P450.
  
 
 0.674
ZPR_3345
Fatty acid alpha hydroxylase, cytochrome P450.
  
 
 0.674
ZPR_2889
Conserved hypothetical protein.
       0.648
hisI
Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; In the N-terminal section; belongs to the PRA-CH family.
   
  
 0.636
ZPR_2888
Conserved hypothetical protein.
       0.569
ZPR_4273
Conserved hypothetical protein.
  
     0.555
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
  
 0.523
ZPR_2769
Acyl-carrier protein.
  
  
 0.523
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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