STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2918Hypothetical protein. (87 aa)    
Predicted Functional Partners:
ZPR_4553
Alpha-ketoglutarate decarboxylase.
    
 
 0.750
ZPR_0821
Penicillin-binding protein.
   
 
 0.686
ZPR_0632
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex.
    
 
 0.616
ZPR_1235
Lipoamide acyltransferase component of 2-oxoacid dehydrogenase complex.
    
 
 0.616
ZPR_3923
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 
 0.616
ZPR_4552
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
    
 
 0.616
ZPR_3938
Glutamate synthase (NADPH) large subunit.
    
   0.600
ZPR_2350
Secreted protein.
   
  0.565
ZPR_2916
Hypothetical protein.
       0.529
ZPR_2917
Isochorismatase family protein.
       0.529
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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