STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3039Endo-beta-1,4-xylanase. (374 aa)    
Predicted Functional Partners:
ZPR_3040
Conserved hypothetical protein.
     0.895
ZPR_1028
Glycosyl hydrolase; Belongs to the glycosyl hydrolase 43 family.
   
 0.889
ZPR_3037
Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
 
   
 0.887
ZPR_1025
Predicted xylanase.
   0.852
ZPR_3030
Alpha-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
   
 0.839
ZPR_1033
Glycosyl hydrolase; Belongs to the glycosyl hydrolase 43 family.
   
 0.829
ZPR_1030
Glycosyl hydrolase; Belongs to the glycosyl hydrolase 43 family.
   
 0.817
ZPR_1027
Glycosyl hydrolase; Belongs to the glycosyl hydrolase 43 family.
   
 0.800
ZPR_1024
Putative esterase.
   0.793
ZPR_2143
Glycosyl hydrolase family protein; Belongs to the glycosyl hydrolase 43 family.
   
 0.770
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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