Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ZPR_3040Conserved hypothetical protein. (875 aa)    
Predicted Functional Partners:
ZPR_3037
Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
     0.912
ZPR_3039
Endo-beta-1,4-xylanase.
     0.896
ZPR_0754
Family 10 glycosyl hydrolase.
     0.836
ZPR_1027
Glycosyl hydrolase; Belongs to the glycosyl hydrolase 43 family.
     0.831
ZPR_3025
Probable acetyl xylan esterase.
     0.827
ZPR_3029
Protein of unknown function DUF303, acetylesterase putative; Belongs to the glycosyl hydrolase 2 family.
 
 
   0.798
ZPR_3030
Alpha-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.789
ZPR_0753
Family 10 glycosyl hydrolase.
 
     0.745
ZPR_1033
Glycosyl hydrolase; Belongs to the glycosyl hydrolase 43 family.
 
     0.717
ZPR_3026
GDSL family lipase.
  
 
   0.701
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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