Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3052Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (207 aa)    
Predicted Functional Partners:
ZPR_3051
Histidine kinase.
 
 
 0.962
ZPR_0426
Two-component system sensor histidine kinase.
 
 
 0.844
ZPR_2206
Histidine kinase.
 
 
 0.843
ZPR_0993
Putative transmembrane protein.
 
 
 0.836
ZPR_3163
Putative transmembrane protein.
 
 
 0.836
ZPR_4480
Putative transmembrane protein.
 
 
 0.836
ZPR_1615
Two-component system sensor histidine kinase.
 
 
 0.808
ZPR_2293
Two-component system sensor histidine kinase/response regulator hybrid.
 
 
 0.768
ZPR_3050
Predicted membrane protein.
       0.675
ZPR_3162
Putative nitrate/nitrite DNA-binding response regulator.
  
     0.656
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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