Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZPR_3099RfaF-like lipopolysaccharide core biosynthesis glycosyl transferase. (349 aa)    
Predicted Functional Partners:
ZPR_3098
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.
       0.810
ZPR_3100
CDP-glycerol glycerophosphotransferase.
       0.785
ZPR_3101
Conserved hypothetical protein.
 
  
 0.695
ZPR_2350
Secreted protein.
  
   0.599
ZPR_0508
2Fe-2S ferredoxin.
   
 
 0.585
ZPR_3097
Holliday junction resolvase-like protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.578
ZPR_0666
Membrane protein.
  
     0.549
ZPR_0846
cyclophilin/FKBP-type peptidyl-prolyl cis-trans isomerase.
   
 
 0.532
ZPR_1686
cyclophilin/FKBP-type peptidyl-prolyl cis-trans isomerase.
   
 
 0.532
ZPR_2422
Cyclophilin-type peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.518
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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