STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3105Cytochrome oxidase assembly protein. (341 aa)    
Predicted Functional Partners:
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.991
ZPR_3106
Conserved hypothetical protein.
       0.744
ZPR_1401
Cytochrome c oxidase, subunit II.
 
 
 0.741
ZPR_3104
tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.693
ZPR_3107
Conserved hypothetical protein.
 
     0.669
ZPR_0583
Cytochrome c oxidase subunit II.
 
  
 0.628
ZPR_0601
Membrane protein.
 
    0.588
ZPR_0597
Cytochrome o ubiquinol oxidase subunit III.
 
  
 0.546
ZPR_3103
YrdC domain-containing protein; Belongs to the SUA5 family.
       0.535
ZPR_0248
Electron transport protein.
  
 
 0.524
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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