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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3191Conserved hypothetical protein. (232 aa)    
Predicted Functional Partners:
ZPR_3190
Oxidoreductase, GMC family protein.
 
     0.951
ZPR_3189
ragB/SusD family protein.
 
     0.784
ZPR_4222
Probable glyoxylate-induced protein.
  
     0.720
ZPR_4220
Probable oxidoreductase.
 
     0.609
ZPR_3487
Oxidoreductase.
 
     0.594
ZPR_2437
Conserved hypothetical protein.
 
     0.589
ZPR_3188
tonB-dependent Receptor Plug domain protein.
 
     0.586
ZPR_3176
Putative outer membrane protein probably involved in nutrient binding.
  
     0.577
ZPR_1939
Putative multi-domain protein.
 
     0.546
ZPR_3174
Conserved hypothetical protein.
  
     0.531
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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