STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3208Conserved hypothetical protein. (491 aa)    
Predicted Functional Partners:
ZPR_3209
Putative outer membrane protein probably involved in nutrient binding.
 
     0.931
ZPR_4715
Outer membrane protein Omp121.
 
 
   0.800
ZPR_3175
tonB dependent receptor.
 
     0.773
ZPR_3176
Putative outer membrane protein probably involved in nutrient binding.
 
     0.772
ZPR_3883
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.735
ZPR_3798
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.688
ZPR_4176
Putative outer membrane protein.
 
     0.670
ZPR_2897
ragB/SusD family protein.
  
 
   0.586
ZPR_1751
Putative outer membrane protein.
 
     0.581
ZPR_4710
Outer membrane protein Omp121.
 
     0.581
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.