STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3229GFO/IDH/MocA family oxidoreductase. (319 aa)    
Predicted Functional Partners:
ZPR_3684
DegT/DnrJ/EryC1/StrS family aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.926
ZPR_3230
3-hydroxybutyryl-CoA dehydrogenase.
 
    0.830
ZPR_0653
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
     0.796
ZPR_2368
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase.
 
     0.686
ZPR_2496
RecName: Full=L-glutamine:2-deoxy-scyllo-inosose aminotransferase; Short=L-glutamine:DOI aminotransferase emb|CAE22472.1| putative 2-deoxy-scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.630
ZPR_3228
Hypothetical protein.
       0.628
ZPR_2259
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.581
ZPR_3231
Conserved hypothetical protein.
 
     0.577
pcm
protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
  
    0.571
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.504
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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