Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3244Conserved hypothetical protein. (286 aa)    
Predicted Functional Partners:
ZPR_3245
Coenzyme A biosynthesis bifunctional protein CoaBC; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
      0.924
ZPR_3246
Conserved hypothetical protein.
 
     0.896
ZPR_3247
Nuclear transition protein.
 
     0.839
ZPR_0590
Conserved hypothetical protein.
  
     0.773
ZPR_3926
Conserved hypothetical protein.
  
     0.768
ZPR_0947
Conserved hypothetical protein.
  
     0.757
ZPR_0617
OmpH family outer membrane protein.
  
     0.753
ZPR_4488
Gliding motility protein GldD.
  
     0.732
ZPR_0935
Conserved hypothetical protein.
  
     0.713
ZPR_3243
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
 
     0.697
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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