Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZPR_3409Metallo-beta-lactamase superfamily protein. (458 aa)    
Predicted Functional Partners:
ZPR_3410
Putative thymidine phosphorylase.
     0.978
ZPR_3407
Putative nuclease.
 
     0.822
ZPR_3411
Phosphoribosyl transferase; Belongs to the ribose-phosphate pyrophosphokinase family.
 
     0.777
ZPR_3408
Conserved hypothetical protein.
       0.742
ZPR_3406
Universal stress protein.
 
     0.683
ZPR_3400
Glyceraldehyde-3-phosphate dehydrogenase.
 
     0.651
ZPR_3403
Carboxylesterase (est-1).
 
     0.643
ZPR_3397
Universal stress protein family protein.
 
     0.599
ZPR_3405
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.575
ZPR_3399
Amino acid transporter.
 
     0.570
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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