STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3415Multidrug-efflux transporter. (404 aa)    
Predicted Functional Partners:
ZPR_3411
Phosphoribosyl transferase; Belongs to the ribose-phosphate pyrophosphokinase family.
 
     0.897
ZPR_3410
Putative thymidine phosphorylase.
 
     0.874
ZPR_3414
Copper-transporting ATPase, P-type (copB).
 
     0.873
ZPR_3413
Phosphoribosylpyrophosphate synthetase.
 
    0.852
ZPR_3400
Glyceraldehyde-3-phosphate dehydrogenase.
 
     0.824
ZPR_3406
Universal stress protein.
 
     0.824
ZPR_3394
Predicted membrane protein.
 
     0.801
ZPR_3403
Carboxylesterase (est-1).
 
     0.782
ZPR_3412
Conserved hypothetical protein.
       0.738
ZPR_3397
Universal stress protein family protein.
 
     0.725
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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