STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3478Glycoside hydrolase, catalytic core; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (531 aa)    
Predicted Functional Partners:
ZPR_0355
Putative glycosidase; Belongs to the glycosyl hydrolase 26 family.
 
   
 0.696
ZPR_0352
Hypothetical protein.
  
     0.694
ZPR_0351
tonB-dependent Receptor Plug domain protein.
  
     0.601
ZPR_4381
Conserved hypothetical protein.
  
     0.520
ZPR_3479
Cell surface protein.
       0.517
ZPR_0753
Family 10 glycosyl hydrolase.
 
     0.484
ZPR_3480
Conserved hypothetical protein.
       0.481
ZPR_3481
Putative outer membrane protein, probably involved in nutrient binding.
       0.481
ZPR_0354
Mannase precursor; Belongs to the glycosyl hydrolase 26 family.
 
   
 0.475
ZPR_3482
Putative outer membrane protein, probably involved in nutrient binding.
       0.461
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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