STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3487Oxidoreductase. (570 aa)    
Predicted Functional Partners:
ZPR_3486
Conserved hypothetical protein.
 
 
 0.959
ZPR_2443
Conserved hypothetical protein.
 
 
 0.801
ZPR_3488
Xylose isomerase-like protein.
       0.779
ZPR_3953
Hypothetical protein.
    
 0.738
ZPR_1939
Putative multi-domain protein.
 
     0.688
ZPR_2438
Apurinic/apyrimidinic endonuclease.
 
     0.655
ZPR_2437
Conserved hypothetical protein.
 
     0.632
ZPR_1370
Ankyrin 2,3/unc44.
    
 0.629
ZPR_4606
Ankyrin.
    
 0.629
ZPR_2440
Nucleoside:proton symporter.
 
     0.621
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.