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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3540Endonuclease/exonuclease/phosphatase family protein. (258 aa)    
Predicted Functional Partners:
ZPR_0105
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
      0.656
ZPR_3505
Esterase PHB depolymerase.
     0.640
ZPR_0211
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.597
ZPR_0344
Cysteine desulfurase-like protein.
    
   0.597
ZPR_0393
Aminotransferase, class V.
    
   0.597
ZPR_2459
Trehalose 6-phosphate synthase.
  
    0.597
ZPR_3672
class-V aminotransferase.
    
   0.597
ZPR_4213
Glycerophosphoryl diester phosphodiesterase.
      0.593
ZPR_1044
Probable secreted protein.
    
0.505
ZPR_3541
Metalloendopeptidase PepO.
       0.455
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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