STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3545Tyrosine type site-specific recombinase. (232 aa)    
Predicted Functional Partners:
ZPR_3544
Tyrosine type site-specific recombinase.
     0.961
ZPR_1276
Putative DNA-binding protein.
 
     0.670
ZPR_2233
Putative DNA-binding protein.
 
     0.667
ZPR_3560
Putative DNA-binding protein.
 
     0.646
ZPR_4100
Putative DNA-binding protein.
 
     0.630
ZPR_1786
Putative DNA binding protein.
 
     0.614
ZPR_3494
Conserved hypothetical protein.
 
     0.478
ZPR_3424
DNA primase.
 
   
 0.473
ZPR_1827
Putative excisionase.
 
     0.443
xerC-2
Tyrosine recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
  
     0.428
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.