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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3550Calcineurin-like phosphoesterase. (499 aa)    
Predicted Functional Partners:
ZPR_3554
RagB/SusD domain-containing protein.
 
     0.843
ZPR_3555
Protein containing tonB-dependent Receptor Plug Domain.
 
     0.800
ZPR_0252
Conserved hypothetical protein.
 
     0.746
ZPR_0253
tonB-dependent Receptor Plug domain protein.
 
     0.733
ZPR_3552
Protein containing peptidase M16 domain; Belongs to the peptidase M16 family.
 
     0.668
ZPR_3551
Hypothetical protein.
  
    0.620
ZPR_3553
Hypothetical protein.
       0.573
ZPR_3556
anti-FecI sigma factor, FecR.
 
     0.554
ZPR_1370
Ankyrin 2,3/unc44.
   
 
 0.500
ZPR_4606
Ankyrin.
   
 
 0.500
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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