Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZPR_3591Low molecular weight phosphotyrosine protein phosphatase. (156 aa)    
Predicted Functional Partners:
ZPR_3592
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
      0.934
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
   
 0.909
ZPR_3675
Fructosamine kinase family protein.
 
     0.715
ZPR_3762
Cryptochrome-like DNA photolyase family protein.
 
  
   0.697
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
      0.624
ZPR_1794
Metallo-beta-lactamase superfamily protein.
  
 
 0.620
ZPR_1810
Rhodanese-like protein.
  
 
 0.620
ZPR_1996
Metallo-beta-lactamase/rhodanese-like domain-containing protein.
  
 
 0.620
ZPR_3019
Metallo-beta-lactamase superfamily protein.
  
 
 0.620
ZPR_0145
Glycosyl hydrolase family protein; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.548
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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