STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3642Serine racemase. (314 aa)    
Predicted Functional Partners:
ZPR_2801
Acetolactate synthase small subunit.
  
 
 0.833
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 0.830
ZPR_3623
Aspartokinase I/homoserine dehydrogenase, threonine-sensitive.
  
 
 0.799
ZPR_2802
Acetolactate synthase large subunit.
 
 0.716
ZPR_2267
Bifunctional aspartokinase I/homoserine dehydrogenase I.
  
 
 0.700
ZPR_2800
Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.
 
  
 0.638
ZPR_3640
D-isomer-specific 2-hydroxyacid dehydrogenase family protein.
  
  
 0.589
ZPR_2269
Threonine synthase.
  
  
 0.581
ZPR_3641
Universal stress protein family protein.
       0.566
ZPR_3938
Glutamate synthase (NADPH) large subunit.
  
 
 0.561
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.