STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3763Deoxyribodipyrimidine photolyase family protein. (515 aa)    
Predicted Functional Partners:
ZPR_3762
Cryptochrome-like DNA photolyase family protein.
   
 0.954
ZPR_4319
Conserved hypothetical protein.
 
     0.741
ZPR_3760
FMN-binding split barrel domain-containing protein.
 
     0.687
ZPR_3124
NAD(P)-binding protein.
      0.656
ZPR_2313
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
   
 0.538
ZPR_2927
Conserved hypothetical protein; Belongs to the UPF0753 family.
  
     0.537
ZPR_3761
Conserved hypothetical protein.
 
     0.457
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.