Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZPR_3799D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase. (436 aa)    
Predicted Functional Partners:
ZPR_2556
Bifunctional transglycosylase/transpeptidase penicillin-binding protein.
  
  
 0.926
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
     
 0.923
ZPR_0092
Bifunctional transglycosylase/transpeptidase penicillin-binding protein.
     
 0.912
ZPR_0658
Penicillin-binding protein.
     
 0.911
ZPR_3813
FtsI-like transpeptidase/penicillin-binding protein.
     
 0.911
ZPR_3800
Muramoyltetrapeptide carboxypeptidase.
 
   
 0.820
ZPR_3796
N-acetylmuramoyl-L-alanine amidase.
 
   
 0.792
ZPR_1370
Ankyrin 2,3/unc44.
   
 
 0.634
ZPR_4606
Ankyrin.
   
 
 0.634
ZPR_3797
Conserved hypothetical protein.
 
     0.587
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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