STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3934MotA/TolQ/ExbB family biopolymer transport protein. (233 aa)    
Predicted Functional Partners:
ZPR_3933
ExbD/TolR family biopolymer transport protein.
 
 
 0.990
ZPR_3932
Conserved hypothetical protein.
 
 
 0.960
ZPR_4543
Biopolymer transport protein ExbD/TolR.
 
 
 0.886
ZPR_4542
Biopolymer transport protein ExbD/TolR.
 
 
 0.856
ZPR_3931
Folylpolyglutamate synthase.
     
 0.782
ZPR_0170
Biopolymer transport protein ExbD/TolR.
  
 
 0.769
ZPR_0842
Tetratricopeptide repeat protein.
 
  
 0.751
ZPR_2366
UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
  
 0.686
ZPR_1131
ABC-type transporter ATP-binding protein.
 
   
 0.684
ZPR_3667
TonB protein.
 
 
 0.672
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.