Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4067Multicopper oxidase. (809 aa)    
Predicted Functional Partners:
ZPR_4255
Conserved hypothetical protein.
 
     0.651
ZPR_4068
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.
 
  
 0.641
ZPR_4253
Conserved hypothetical protein.
 
     0.628
ZPR_3383
Conserved hypothetical protein.
 
     0.585
ZPR_3381
Conserved hypothetical protein.
 
     0.582
tatC
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
    
 
 0.577
ZPR_4069
Conserved hypothetical protein.
 
     0.508
ZPR_0676
Permease.
  
  
 0.484
ZPR_4066
Membrane protein.
       0.457
ZPR_4254
Conserved hypothetical protein.
 
   
 0.434
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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