Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4079Conserved hypothetical protein; Belongs to the Fur family. (140 aa)    
Predicted Functional Partners:
ZPR_4080
Nitrogen regulatory protein P-II.
 
    0.779
ZPR_4078
Conserved hypothetical protein.
 
     0.771
ZPR_4081
Putative lipoprotein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.716
ZPR_4076
Conserved hypothetical protein.
       0.610
ZPR_4077
Predicted membrane protein.
       0.610
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.582
ZPR_3987
Hypothetical protein.
  
    0.554
ZPR_4082
AcrB/AcrD/AcrF family heavy metal cation efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.530
ZPR_1231
Conserved hypothetical protein.
  
    0.502
ZPR_4075
Conserved hypothetical protein.
 
     0.488
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.