STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4142AcrB/AcrD/AcrF family membrane transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1065 aa)    
Predicted Functional Partners:
ZPR_4143
HlyD family secretion protein.
 
   0.966
ZPR_4141
Outer membrane efflux protein.
   0.964
ZPR_4140
Conserved hypothetical protein.
       0.774
ZPR_4144
ABC-type transporter ATP-binding protein.
       0.584
ZPR_4558
Probable HlyD-family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.512
ZPR_4327
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.457
ZPR_2227
Putative transport related membrane protein.
  
     0.442
ZPR_4328
AcrB/AcrD/AcrF family heavy metal cation efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
0.441
ZPR_4082
AcrB/AcrD/AcrF family heavy metal cation efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
0.417
ZPR_4145
Conserved hypothetical protein.
       0.412
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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