STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4163Conserved hypothetical protein. (263 aa)    
Predicted Functional Partners:
ZPR_4162
Conserved hypothetical protein.
 
     0.948
ZPR_4164
Conserved hypothetical protein.
 
    
0.728
ZPR_0689
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.653
ZPR_1318
Carboxypeptidase-like, regulatory region.
 
     0.635
ZPR_4165
Conserved hypothetical protein.
 
    
0.633
ZPR_1302
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.560
ZPR_3712
Conserved hypothetical protein.
  
     0.559
ZPR_0688
ragA protein.
  
     0.512
ZPR_4421
Lambda repressor-like DNA-binding protein.
  
     0.468
cutC
Probable copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
       0.446
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.