Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZPR_4200Transmembrane family-2 glycosyl transferase. (476 aa)    
Predicted Functional Partners:
ZPR_4199
RfbJ-like lipopolysaccharide biosynthesis glycosyl transferase.
 
  
 0.903
ZPR_4197
Iron-sulfur binding transmembrane protein.
 
     0.829
ZPR_4202
Mannosyltransferase.
 
    0.787
ZPR_4195
Nitrite reductase (NAD(P)H) large subunit.
 
     0.765
ZPR_4194
Conserved hypothetical protein.
 
  
 0.701
ZPR_1995
Sterol desaturase family protein.
 
     0.563
ZPR_1793
Probable transmembrane protein.
 
     0.554
ZPR_4313
Creatinine amidohydrolase.
  
  
 0.506
ZPR_4193
Secreted protein containing DUF547.
 
     0.460
ZPR_4198
Putative cyclase.
       0.458
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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