STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4211TspO/MBR family protein. (158 aa)    
Predicted Functional Partners:
ZPR_1383
Proline racemase; Belongs to the proline racemase family.
   
    0.590
ZPR_4210
Diphosphomevalonate decarboxylase.
       0.588
ZPR_2313
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
  
  
 0.441
ZPR_3762
Cryptochrome-like DNA photolyase family protein.
  
  
 0.441
ZPR_4208
Prenyltransferase family protein.
  
    0.434
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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