STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4338Alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. (329 aa)    
Predicted Functional Partners:
ZPR_4337
Glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.967
ZPR_4332
Putative beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
   
 0.879
ZPR_2730
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
   
 0.873
ZPR_4339
Conserved hypothetical protein.
 
     0.753
ZPR_4335
Glutaminase.
 
     0.740
ZPR_0917
Endo-1,4-beta-xylanase D precursor; Belongs to the glycosyl hydrolase 43 family.
   
 0.731
ZPR_4340
Putative outer membrane protein.
 
     0.673
ZPR_4341
Putative TonB dependent receptor outer membrane protein.
 
     0.673
ZPR_2144
Glycosyl hydrolases family 43.
 
   
 0.639
ZPR_4334
Putative glycosyl hydrolase.
 
     0.623
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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