STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4366Mandelate racemase/muconate lactonizing protein. (439 aa)    
Predicted Functional Partners:
ZPR_4368
Short-chain alcohol dehydrogenase.
 
 
 0.980
ZPR_4361
Amidohydrolase.
 
  
 0.977
ZPR_4369
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase.
 
  
 0.832
ZPR_4367
Putative exported alpha-L-fucosidase protein.
 
     0.814
ZPR_1994
Twin-arginine translocation pathway signal.
 
    0.525
ZPR_4364
Bacterial regulatory helix-turn-helix protein.
       0.520
ZPR_4365
Transcriptional regulator.
       0.520
ZPR_4362
Alcohol dehydrogenase.
  
  
 0.409
ZPR_4360
Oxidoreductase, short-chain dehydrogenase/reductase family protein.
 
  
 0.408
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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