STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4385Transcriptional regulator. (246 aa)    
Predicted Functional Partners:
ZPR_4379
Transcriptional repressor.
 
  
 0.844
ZPR_4384
Glycosyl hydrolase family 92.
 
     0.700
ZPR_4381
Conserved hypothetical protein.
 
     0.694
ZPR_4382
ragB/SusD family protein.
 
     0.645
ZPR_1018
Putative transcriptional regulator.
  
  
 0.600
ZPR_1510
Putative AraC-family regulatory protein.
  
  
 0.600
ZPR_2138
Activator protein MtlR.
  
  
 0.600
ZPR_4380
Glycosyl hydrolase family 76.
 
     0.585
ZPR_4378
ROK family member transcriptional repressor.
 
  
 0.537
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
     
 0.521
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.