Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
ZPR_4444Conserved hypothetical protein. (237 aa)    
Predicted Functional Partners:
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
      0.858
ZPR_4445
DNA-3-methyladenine glycosylase.
       0.773
ZPR_0480
Conserved hypothetical protein.
  
     0.764
ZPR_4542
Biopolymer transport protein ExbD/TolR.
 
 
 0.738
ZPR_2027
Conserved hypothetical protein.
  
     0.713
ZPR_3667
TonB protein.
  
     0.686
ZPR_4543
Biopolymer transport protein ExbD/TolR.
 
 
 0.686
ZPR_0048
Membrane protein.
  
     0.672
ZPR_3484
Putative outer membrane protein, probably involved in nutrient binding.
  
 
 0.669
ZPR_3880
TonB-dependent outer membrane receptor.
  
 
 0.658
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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