STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4469PcrB-like protein; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P); Belongs to the GGGP/HepGP synthase family. Group II subfamily. (234 aa)    
Predicted Functional Partners:
ZPR_2324
Prenyltransferase.
 
  
 0.981
ZPR_4470
4-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
       0.815
ZPR_0594
Conserved hypothetical protein.
  
     0.766
ZPR_4299
Transmembrane family-2 glycosyl transferase.
  
     0.763
ZPR_3746
Transmembrane family-2 glycosyl transferase.
  
     0.752
ZPR_1089
Methyltransferase.
  
    0.740
ZPR_0159
Secreted protein.
  
     0.712
ZPR_1091
Polysaccharide export outer membrane protein.
  
     0.696
ZPR_1859
Conserved hypothetical protein.
  
     0.660
ZPR_1124
Glycosyl transferases group 1.
  
     0.632
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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