Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ZPR_0298 | panC | ZPR_0298 | ZPR_4519 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family. | Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.901 |
ZPR_0298 | panD | ZPR_0298 | ZPR_4520 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family. | Aspartate 1-decarboxylase precursor; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.906 |
ZPR_0939 | ZPR_1789 | ZPR_0939 | ZPR_1789 | Aspartate aminotransferase. | Asparaginase. | 0.909 |
ZPR_0939 | ZPR_3742 | ZPR_0939 | ZPR_3742 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.917 |
ZPR_0939 | ZPR_4547 | ZPR_0939 | ZPR_4547 | Aspartate aminotransferase. | L-asparaginase I. | 0.909 |
ZPR_0939 | panD | ZPR_0939 | ZPR_4520 | Aspartate aminotransferase. | Aspartate 1-decarboxylase precursor; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.822 |
ZPR_0939 | purA | ZPR_0939 | ZPR_1674 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.914 |
ZPR_0939 | purA-2 | ZPR_0939 | ZPR_2223 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.924 |
ZPR_1789 | ZPR_0939 | ZPR_1789 | ZPR_0939 | Asparaginase. | Aspartate aminotransferase. | 0.909 |
ZPR_1789 | ZPR_3742 | ZPR_1789 | ZPR_3742 | Asparaginase. | Aspartate aminotransferase. | 0.909 |
ZPR_1789 | ZPR_4547 | ZPR_1789 | ZPR_4547 | Asparaginase. | L-asparaginase I. | 0.900 |
ZPR_1789 | panD | ZPR_1789 | ZPR_4520 | Asparaginase. | Aspartate 1-decarboxylase precursor; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.828 |
ZPR_1789 | purA | ZPR_1789 | ZPR_1674 | Asparaginase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.900 |
ZPR_1789 | purA-2 | ZPR_1789 | ZPR_2223 | Asparaginase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.900 |
ZPR_3742 | ZPR_0939 | ZPR_3742 | ZPR_0939 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.917 |
ZPR_3742 | ZPR_1789 | ZPR_3742 | ZPR_1789 | Aspartate aminotransferase. | Asparaginase. | 0.909 |
ZPR_3742 | ZPR_4547 | ZPR_3742 | ZPR_4547 | Aspartate aminotransferase. | L-asparaginase I. | 0.909 |
ZPR_3742 | panD | ZPR_3742 | ZPR_4520 | Aspartate aminotransferase. | Aspartate 1-decarboxylase precursor; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.822 |
ZPR_3742 | purA | ZPR_3742 | ZPR_1674 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.914 |
ZPR_3742 | purA-2 | ZPR_3742 | ZPR_2223 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.914 |
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