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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4535Membrane protein. (811 aa)    
Predicted Functional Partners:
asnS
asparaginyl-tRNA synthetase.
       0.662
ZPR_4534
Carboxypeptidase-like protein, regulatory region.
       0.625
ZPR_2025
BNR repeat-containing glycosyl hydrolase.
 
  
 0.518
ZPR_2861
Outer membrane lipoprotein carrier protein.
 
  
 0.503
frr
Ribosome releasing factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.466
ZPR_3076
Conserved hypothetical protein.
  
   
 0.451
ZPR_0041
Conserved hypothetical protein.
 
     0.444
ZPR_1209
Conserved hypothetical protein.
  
     0.428
ZPR_0454
TPR repeat-containing protein.
  
     0.423
ZPR_0622
CBS domain-containing protein.
  
     0.416
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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