STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4558Probable HlyD-family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (388 aa)    
Predicted Functional Partners:
ZPR_4559
Multidrug resistance protein D; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.964
ZPR_4557
Outer membrane efflux protein.
 
   0.911
ZPR_0607
HlyD family secretion protein.
  
  0.810
ZPR_4556
TetR family transcriptional regulator.
 
     0.797
ZPR_4645
Outer membrane efflux protein.
  
  0.796
ZPR_1586
Outer membrane protein, putative.
   
  0.759
ZPR_3568
Outer membrane efflux protein precursor.
   
  0.759
ZPR_4108
Outer membrane protein, putative.
   
  0.759
ZPR_4141
Outer membrane efflux protein.
   
  0.759
ZPR_4082
AcrB/AcrD/AcrF family heavy metal cation efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.725
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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