Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4577Histone deacetylase family protein. (279 aa)    
Predicted Functional Partners:
ZPR_0846
cyclophilin/FKBP-type peptidyl-prolyl cis-trans isomerase.
  
 0.832
ZPR_1686
cyclophilin/FKBP-type peptidyl-prolyl cis-trans isomerase.
  
 0.832
ZPR_3953
Hypothetical protein.
   
 0.827
ZPR_1191
Heat shock protein 90.
    
 0.764
ZPR_1370
Ankyrin 2,3/unc44.
 
 
 0.757
cobB
NAD-dependent histone deacetylase; Belongs to the sirtuin family. Class III subfamily.
    
 0.756
ZPR_4128
Protein phosphatase 2C-related protein.
   
 
 0.728
ZPR_4606
Ankyrin.
   
 0.722
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 0.720
ZPR_0768
Putative glycerol diffusion channel; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.708
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.