Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ZPR_4635Putative transporter permease protein. (805 aa)    
Predicted Functional Partners:
ZPR_4631
ABC-type transporter ATP-binding protein.
 
 
 0.915
ZPR_4630
Efflux transporter, MFP component, RND family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.891
ZPR_4644
Putative ABC transport system, ATP-binding protein.
 
 
 0.868
ZPR_4633
Putative ABC transporter permease.
 
   
0.835
ZPR_4632
Putative FtsX-related transmembrane transport protein.
 
   
0.833
ZPR_4634
Putative FtsX-related transmembrane transport protein.
 
   
0.832
ZPR_4628
Sensory box sensor histidine kinase.
 
     0.826
ZPR_4636
Putative transporter permease protein.
 
   
0.785
ZPR_4637
Putative ABC transporter permease.
 
   
0.732
ZPR_4645
Outer membrane efflux protein.
 
   0.732
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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