Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZPR_4664Signal transduction histidine kinase, LytS. (533 aa)    
Predicted Functional Partners:
ZPR_4665
LytTR family two component transcriptional regulator.
 
   0.958
ZPR_2432
Two-component response transcriptional regulator.
 
   0.824
ZPR_1954
Two-component response transcriptional regulator.
 
   0.818
ZPR_2119
Two-component response transcriptional regulator.
 
   0.818
ZPR_4186
Two-component system response regulator.
 
   0.818
ZPR_0302
LytTR family two component transcriptional regulator.
 
   0.817
ZPR_3577
Two-component system response regulator.
 
   0.817
ZPR_4433
Two-component response regulator.
 
   0.817
ZPR_2848
Two-component response regulator.
 
   0.815
ZPR_4662
TonB-dependent receptor, plug.
 
     0.814
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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