STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4672HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1000 aa)    
Predicted Functional Partners:
ZPR_4675
Type I restriction-modification system DNA methylase.
 
 
 0.964
ZPR_4673
Restriction modification system DNA specificity subunit.
 
  
 0.948
ZPR_3435
Type I restriction-modification system methyltransferase subunit like protein.
 
 
 0.933
ZPR_3434
Conserved hypothetical protein.
 
  
 0.892
ZPR_0879
Type I restriction-modification system, M subunit.
 
 
 0.857
ZPR_4122
Putative DNA methylase HsdM.
 
 
 0.769
ZPR_4671
Hypothetical protein.
       0.693
ZPR_0880
Restriction modification system DNA specificity subunit.
  
  
 0.556
ZPR_4124
Type I restriction-modification system specificity determinant.
  
  
 0.556
ZPR_1767
Conserved hypothetical protein.
  
    0.537
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.