Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4676Predicted nucleotidyltransferase. (354 aa)    
Predicted Functional Partners:
ZPR_4677
Predicted nucleotidyltransferase.
    
0.946
ZPR_2185
phytanoyl-CoA dioxygenase.
 
     0.553
ZPR_2967
SPFH domain / Band 7 family protein.
 
  
 0.517
ZPR_4674
Protein containing KAP family P-loop domain.
       0.511
ZPR_4675
Type I restriction-modification system DNA methylase.
       0.511
ZPR_4673
Restriction modification system DNA specificity subunit.
       0.469
ZPR_3323
Conserved hypothetical protein.
  
     0.451
ZPR_4678
Hypothetical protein.
       0.448
ZPR_3173
KWG Leptospira.
  
     0.406
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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