STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4698Putative ROK family transcriptional repressor protein. (423 aa)    
Predicted Functional Partners:
ZPR_1116
UDP-N-acetylglucosamine 2-epimerase.
 
   
 0.920
ZPR_4699
Glucosamine-6-phosphate deaminase.
   
 0.833
ZPR_4700
N-acetylmuramoyl-L-alanine amidase.
 
     0.701
ZPR_2216
Phosphomannose isomerase type I.
 
  
 0.571
ZPR_4696
beta-N-acetylglucosaminidase; Belongs to the glycosyl hydrolase 3 family.
     
 0.539
ZPR_4697
Conserved hypothetical protein.
       0.493
ZPR_3888
Recombination factor protein RarA.
 
     0.400
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.