Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BBA_04852 | BBA_05067 | J4KNV4 | J5JU73 | RNA-dependent RNA polymerase. | RNase3 domain-containing protein; Belongs to the helicase family. Dicer subfamily. | 0.510 |
BBA_04852 | BBA_05458 | J4KNV4 | J4KNF0 | RNA-dependent RNA polymerase. | RNase3 domain-containing protein. | 0.493 |
BBA_04852 | BBA_05659 | J4KNV4 | J5JID0 | RNA-dependent RNA polymerase. | Poly(A) RNA polymerase cid14. | 0.492 |
BBA_04852 | BBA_06556 | J4KNV4 | J4UK96 | RNA-dependent RNA polymerase. | RNA helicase. | 0.568 |
BBA_04852 | BBA_06874 | J4KNV4 | J4W0Y9 | RNA-dependent RNA polymerase. | 54S ribosomal protein L3. | 0.414 |
BBA_04852 | BBA_07983 | J4KNV4 | J4UHZ0 | RNA-dependent RNA polymerase. | RNase3 domain-containing protein; Belongs to the helicase family. Dicer subfamily. | 0.484 |
BBA_04852 | BBA_08292 | J4KNV4 | J4UHN7 | RNA-dependent RNA polymerase. | RNA helicase. | 0.569 |
BBA_04852 | BBA_08341 | J4KNV4 | J5JGD5 | RNA-dependent RNA polymerase. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.540 |
BBA_04852 | BBA_08938 | J4KNV4 | J5JEJ2 | RNA-dependent RNA polymerase. | RNA helicase. | 0.569 |
BBA_05067 | BBA_04852 | J5JU73 | J4KNV4 | RNase3 domain-containing protein; Belongs to the helicase family. Dicer subfamily. | RNA-dependent RNA polymerase. | 0.510 |
BBA_05067 | BBA_06556 | J5JU73 | J4UK96 | RNase3 domain-containing protein; Belongs to the helicase family. Dicer subfamily. | RNA helicase. | 0.427 |
BBA_05067 | BBA_08292 | J5JU73 | J4UHN7 | RNase3 domain-containing protein; Belongs to the helicase family. Dicer subfamily. | RNA helicase. | 0.430 |
BBA_05067 | BBA_08938 | J5JU73 | J5JEJ2 | RNase3 domain-containing protein; Belongs to the helicase family. Dicer subfamily. | RNA helicase. | 0.514 |
BBA_05458 | BBA_04852 | J4KNF0 | J4KNV4 | RNase3 domain-containing protein. | RNA-dependent RNA polymerase. | 0.493 |
BBA_05458 | BBA_06556 | J4KNF0 | J4UK96 | RNase3 domain-containing protein. | RNA helicase. | 0.450 |
BBA_05458 | BBA_08292 | J4KNF0 | J4UHN7 | RNase3 domain-containing protein. | RNA helicase. | 0.444 |
BBA_05458 | BBA_08938 | J4KNF0 | J5JEJ2 | RNase3 domain-containing protein. | RNA helicase. | 0.599 |
BBA_05659 | BBA_04852 | J5JID0 | J4KNV4 | Poly(A) RNA polymerase cid14. | RNA-dependent RNA polymerase. | 0.492 |
BBA_05659 | BBA_08341 | J5JID0 | J5JGD5 | Poly(A) RNA polymerase cid14. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.492 |
BBA_06556 | BBA_04852 | J4UK96 | J4KNV4 | RNA helicase. | RNA-dependent RNA polymerase. | 0.568 |
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