Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BBA_01303 | BBA_02021 | J5JXY2 | J5K4J7 | Ribosomal protein S2. | Nucleoside diphosphate kinase. | 0.998 |
BBA_01303 | BBA_02935 | J5JXY2 | J4KPU0 | Ribosomal protein S2. | C2H2 type zinc finger domain protein. | 0.632 |
BBA_01303 | BBA_03844 | J5JXY2 | J4WAX2 | Ribosomal protein S2. | Ribosomal protein S6. | 0.999 |
BBA_01303 | BBA_05536 | J5JXY2 | J4ULV4 | Ribosomal protein S2. | 37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
BBA_01303 | BBA_07159 | J5JXY2 | J4VZY0 | Ribosomal protein S2. | Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
BBA_01303 | BBA_08238 | J5JXY2 | J5JH98 | Ribosomal protein S2. | 37S ribosomal protein S11. | 0.999 |
BBA_01303 | BBA_08879 | J5JXY2 | J4VUM7 | Ribosomal protein S2. | Mitochondrial ribosomal protein S16. | 0.999 |
BBA_02021 | BBA_01303 | J5K4J7 | J5JXY2 | Nucleoside diphosphate kinase. | Ribosomal protein S2. | 0.998 |
BBA_02021 | BBA_02935 | J5K4J7 | J4KPU0 | Nucleoside diphosphate kinase. | C2H2 type zinc finger domain protein. | 0.632 |
BBA_02021 | BBA_03844 | J5K4J7 | J4WAX2 | Nucleoside diphosphate kinase. | Ribosomal protein S6. | 0.998 |
BBA_02021 | BBA_05536 | J5K4J7 | J4ULV4 | Nucleoside diphosphate kinase. | 37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | 0.990 |
BBA_02021 | BBA_06844 | J5K4J7 | J4W0U8 | Nucleoside diphosphate kinase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.411 |
BBA_02021 | BBA_07159 | J5K4J7 | J4VZY0 | Nucleoside diphosphate kinase. | Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
BBA_02021 | BBA_08238 | J5K4J7 | J5JH98 | Nucleoside diphosphate kinase. | 37S ribosomal protein S11. | 0.997 |
BBA_02021 | BBA_08879 | J5K4J7 | J4VUM7 | Nucleoside diphosphate kinase. | Mitochondrial ribosomal protein S16. | 0.997 |
BBA_02935 | BBA_01303 | J4KPU0 | J5JXY2 | C2H2 type zinc finger domain protein. | Ribosomal protein S2. | 0.632 |
BBA_02935 | BBA_02021 | J4KPU0 | J5K4J7 | C2H2 type zinc finger domain protein. | Nucleoside diphosphate kinase. | 0.632 |
BBA_02935 | BBA_03844 | J4KPU0 | J4WAX2 | C2H2 type zinc finger domain protein. | Ribosomal protein S6. | 0.633 |
BBA_02935 | BBA_05532 | J4KPU0 | J5JJH9 | C2H2 type zinc finger domain protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.632 |
BBA_02935 | BBA_05536 | J4KPU0 | J4ULV4 | C2H2 type zinc finger domain protein. | 37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | 0.631 |
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