Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BBA_00138 | BBA_06069 | J5K268 | J4KN11 | Nuclear pore glycoprotein p62. | RanBP1 domain-containing protein. | 0.999 |
BBA_00138 | BBA_07205 | J5K268 | J5JL26 | Nuclear pore glycoprotein p62. | Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation. | 0.513 |
BBA_00138 | BBA_09561 | J5K268 | J4UFT1 | Nuclear pore glycoprotein p62. | F-box domain, Skp2. | 0.840 |
BBA_00261 | BBA_01721 | J5K925 | J5K6Q9 | WD domain-containing protein. | COMPASS complex protein. | 0.999 |
BBA_00261 | BBA_05250 | J5K925 | J4KNK0 | WD domain-containing protein. | Histone acetyltransferase. | 0.719 |
BBA_00261 | BBA_07205 | J5K925 | J5JL26 | WD domain-containing protein. | Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation. | 0.997 |
BBA_00261 | BBA_08918 | J5K925 | J5JEH3 | WD domain-containing protein. | Tetratricopeptide-like protein. | 0.815 |
BBA_00261 | BBA_09561 | J5K925 | J4UFT1 | WD domain-containing protein. | F-box domain, Skp2. | 0.870 |
BBA_00261 | BBA_09944 | J5K925 | J4UF78 | WD domain-containing protein. | Histone H2A; Belongs to the histone H2A family. | 0.957 |
BBA_00261 | BBA_10034 | J5K925 | J4VQS0 | WD domain-containing protein. | Histone H3; Belongs to the histone H3 family. | 0.982 |
BBA_01721 | BBA_00261 | J5K6Q9 | J5K925 | COMPASS complex protein. | WD domain-containing protein. | 0.999 |
BBA_01721 | BBA_05250 | J5K6Q9 | J4KNK0 | COMPASS complex protein. | Histone acetyltransferase. | 0.751 |
BBA_01721 | BBA_07205 | J5K6Q9 | J5JL26 | COMPASS complex protein. | Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation. | 0.997 |
BBA_01721 | BBA_08918 | J5K6Q9 | J5JEH3 | COMPASS complex protein. | Tetratricopeptide-like protein. | 0.661 |
BBA_01721 | BBA_09561 | J5K6Q9 | J4UFT1 | COMPASS complex protein. | F-box domain, Skp2. | 0.869 |
BBA_01721 | BBA_09944 | J5K6Q9 | J4UF78 | COMPASS complex protein. | Histone H2A; Belongs to the histone H2A family. | 0.956 |
BBA_01721 | BBA_10034 | J5K6Q9 | J4VQS0 | COMPASS complex protein. | Histone H3; Belongs to the histone H3 family. | 0.981 |
BBA_01980 | BBA_09561 | J4WG93 | J4UFT1 | Fungal specific transcription factor. | F-box domain, Skp2. | 0.726 |
BBA_05250 | BBA_00261 | J4KNK0 | J5K925 | Histone acetyltransferase. | WD domain-containing protein. | 0.719 |
BBA_05250 | BBA_01721 | J4KNK0 | J5K6Q9 | Histone acetyltransferase. | COMPASS complex protein. | 0.751 |
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