Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BBA_00276 | BBA_02918 | J5K938 | J4URB0 | Sphingolipid long chain base sensory protein, putative. | Major facilitator superfamily transporter. | 0.417 |
BBA_02082 | BBA_02918 | J4UTB6 | J4URB0 | RNA polymerase Rpb4. | Major facilitator superfamily transporter. | 0.432 |
BBA_02082 | BBA_03092 | J4UTB6 | J5K218 | RNA polymerase Rpb4. | RNA polymerase Rpb3/RpoA insert domain-containing protein. | 0.999 |
BBA_02082 | BBA_03525 | J4UTB6 | J4WCG0 | RNA polymerase Rpb4. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.999 |
BBA_02082 | BBA_06914 | J4UTB6 | J4W139 | RNA polymerase Rpb4. | RNA polymerase Rpb5 domain-containing protein. | 0.999 |
BBA_02082 | BBA_10291 | J4UTB6 | J4KKN4 | RNA polymerase Rpb4. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
BBA_02593 | BBA_02918 | J5K3E1 | J4URB0 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Major facilitator superfamily transporter. | 0.421 |
BBA_02593 | BBA_06844 | J5K3E1 | J4W0U8 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.593 |
BBA_02918 | BBA_00276 | J4URB0 | J5K938 | Major facilitator superfamily transporter. | Sphingolipid long chain base sensory protein, putative. | 0.417 |
BBA_02918 | BBA_02082 | J4URB0 | J4UTB6 | Major facilitator superfamily transporter. | RNA polymerase Rpb4. | 0.432 |
BBA_02918 | BBA_02593 | J4URB0 | J5K3E1 | Major facilitator superfamily transporter. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.421 |
BBA_02918 | BBA_03092 | J4URB0 | J5K218 | Major facilitator superfamily transporter. | RNA polymerase Rpb3/RpoA insert domain-containing protein. | 0.458 |
BBA_02918 | BBA_03525 | J4URB0 | J4WCG0 | Major facilitator superfamily transporter. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.494 |
BBA_02918 | BBA_06844 | J4URB0 | J4W0U8 | Major facilitator superfamily transporter. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.452 |
BBA_02918 | BBA_06914 | J4URB0 | J4W139 | Major facilitator superfamily transporter. | RNA polymerase Rpb5 domain-containing protein. | 0.494 |
BBA_02918 | BBA_07664 | J4URB0 | J5JBL3 | Major facilitator superfamily transporter. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.528 |
BBA_02918 | BBA_09419 | J4URB0 | J4UG14 | Major facilitator superfamily transporter. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.528 |
BBA_02918 | BBA_10291 | J4URB0 | J4KKN4 | Major facilitator superfamily transporter. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.494 |
BBA_03092 | BBA_02082 | J5K218 | J4UTB6 | RNA polymerase Rpb3/RpoA insert domain-containing protein. | RNA polymerase Rpb4. | 0.999 |
BBA_03092 | BBA_02918 | J5K218 | J4URB0 | RNA polymerase Rpb3/RpoA insert domain-containing protein. | Major facilitator superfamily transporter. | 0.458 |
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