Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BBA_00156 | BBA_00597 | J5K8S6 | J4UX33 | LSM domain-containing protein. | RNA recognition domain-containing protein. | 0.994 |
BBA_00156 | BBA_01633 | J5K8S6 | J5JZ45 | LSM domain-containing protein. | Small nuclear ribonucleoprotein G. | 0.999 |
BBA_00156 | BBA_02540 | J5K8S6 | J5JUV8 | LSM domain-containing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
BBA_00156 | BBA_02575 | J5K8S6 | J5JV04 | LSM domain-containing protein. | Pre-mRNA splicing factor cwc2. | 0.983 |
BBA_00156 | BBA_03414 | J5K8S6 | J4KPK9 | LSM domain-containing protein. | PRP1 splicing factor. | 0.992 |
BBA_00156 | BBA_04166 | J5K8S6 | J5JNY1 | LSM domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
BBA_00156 | BBA_04718 | J5K8S6 | J4W7H7 | LSM domain-containing protein. | LSM domain-containing protein. | 0.999 |
BBA_00156 | BBA_05186 | J5K8S6 | J4W637 | LSM domain-containing protein. | U2 small nuclear ribonucleoprotein A. | 0.996 |
BBA_00156 | BBA_05315 | J5K8S6 | J4KNL3 | LSM domain-containing protein. | Elongation factor Tu GTP binding domain-containing protein. | 0.994 |
BBA_00156 | BBA_06607 | J5K8S6 | J5JFQ8 | LSM domain-containing protein. | Splicing factor 3a. | 0.990 |
BBA_00597 | BBA_00156 | J4UX33 | J5K8S6 | RNA recognition domain-containing protein. | LSM domain-containing protein. | 0.994 |
BBA_00597 | BBA_01633 | J4UX33 | J5JZ45 | RNA recognition domain-containing protein. | Small nuclear ribonucleoprotein G. | 0.995 |
BBA_00597 | BBA_02540 | J4UX33 | J5JUV8 | RNA recognition domain-containing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.995 |
BBA_00597 | BBA_02575 | J4UX33 | J5JV04 | RNA recognition domain-containing protein. | Pre-mRNA splicing factor cwc2. | 0.989 |
BBA_00597 | BBA_03414 | J4UX33 | J4KPK9 | RNA recognition domain-containing protein. | PRP1 splicing factor. | 0.983 |
BBA_00597 | BBA_04166 | J4UX33 | J5JNY1 | RNA recognition domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.996 |
BBA_00597 | BBA_04718 | J4UX33 | J4W7H7 | RNA recognition domain-containing protein. | LSM domain-containing protein. | 0.995 |
BBA_00597 | BBA_05186 | J4UX33 | J4W637 | RNA recognition domain-containing protein. | U2 small nuclear ribonucleoprotein A. | 0.997 |
BBA_00597 | BBA_05315 | J4UX33 | J4KNL3 | RNA recognition domain-containing protein. | Elongation factor Tu GTP binding domain-containing protein. | 0.985 |
BBA_00597 | BBA_06607 | J4UX33 | J5JFQ8 | RNA recognition domain-containing protein. | Splicing factor 3a. | 0.987 |
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