Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BBA_00656 | BBA_05021 | J5KA43 | J4W6X9 | BZIP transcription factor, bZIP-1. | L-ornithine 5-monooxygenase. | 0.540 |
BBA_01902 | BBA_05021 | J4UT03 | J4W6X9 | Glyoxylate reductase. | L-ornithine 5-monooxygenase. | 0.540 |
BBA_03671 | BBA_05021 | J4UPH3 | J4W6X9 | Nonribosomal peptide synthase, putative. | L-ornithine 5-monooxygenase. | 0.463 |
BBA_03671 | BBA_06995 | J4UPH3 | J4W0D1 | Nonribosomal peptide synthase, putative. | Aerobactin siderophore biosynthesis protein iucB. | 0.467 |
BBA_05020 | BBA_05021 | J4KNP2 | J4W6X9 | Amino acid adenylation domain-containing protein. | L-ornithine 5-monooxygenase. | 0.459 |
BBA_05021 | BBA_00656 | J4W6X9 | J5KA43 | L-ornithine 5-monooxygenase. | BZIP transcription factor, bZIP-1. | 0.540 |
BBA_05021 | BBA_01902 | J4W6X9 | J4UT03 | L-ornithine 5-monooxygenase. | Glyoxylate reductase. | 0.540 |
BBA_05021 | BBA_03671 | J4W6X9 | J4UPH3 | L-ornithine 5-monooxygenase. | Nonribosomal peptide synthase, putative. | 0.463 |
BBA_05021 | BBA_05020 | J4W6X9 | J4KNP2 | L-ornithine 5-monooxygenase. | Amino acid adenylation domain-containing protein. | 0.459 |
BBA_05021 | BBA_06440 | J4W6X9 | J5JN42 | L-ornithine 5-monooxygenase. | Transcription factor. | 0.540 |
BBA_05021 | BBA_06995 | J4W6X9 | J4W0D1 | L-ornithine 5-monooxygenase. | Aerobactin siderophore biosynthesis protein iucB. | 0.631 |
BBA_05021 | BBA_08227 | J4W6X9 | J4VWS1 | L-ornithine 5-monooxygenase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.424 |
BBA_06440 | BBA_05021 | J5JN42 | J4W6X9 | Transcription factor. | L-ornithine 5-monooxygenase. | 0.540 |
BBA_06995 | BBA_03671 | J4W0D1 | J4UPH3 | Aerobactin siderophore biosynthesis protein iucB. | Nonribosomal peptide synthase, putative. | 0.467 |
BBA_06995 | BBA_05021 | J4W0D1 | J4W6X9 | Aerobactin siderophore biosynthesis protein iucB. | L-ornithine 5-monooxygenase. | 0.631 |
BBA_08227 | BBA_05021 | J4VWS1 | J4W6X9 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | L-ornithine 5-monooxygenase. | 0.424 |